BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009B11SP1|AL425992
(813 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1442 1579 0.0
>3x_Contig1442
Length = 8270
Score = 1579 bits (796), Expect = 0.0
Identities = 808/813 (99%)
Strand = Plus / Plus
Query: 1 gatcgtatccattctaaaggctatttgcatggctacaaatgttcatggtaaggatcctca 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 894 gatcgtatccattctcaaggctatttgcatggctacaaatgttcatggtaaggatcctca 953
Query: 61 ggatgggtcctgttcccagacacttgtcgtttatcatggatgggaaccgccgttatgcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 954 ggatgggtcctgttcccagacacttgtcgtttatcatggatgggaaccgccgttatgcaa 1013
Query: 121 agaaattggatcaacctgtgaaagagggtcatagagccggagcgcaanacattaatagac 180
|||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 1014 agaaattggatcaacctgtgaaagagggtcatagagccggagggctacacattaatagac 1073
Query: 181 atcttacatatctgcagaaggttgaatgtgagtagtgtgagtgcatatgcgttctccatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1074 atcttacatatctgcagaaggttgaatgtgagtagtgtgagtgcatatgcgttctccatt 1133
Query: 241 gagaacttcaatagatctcctcaggaagtcgcgactctcatggaactcttgggatattat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1134 gagaacttcaatagatctcctcaggaagtcgcgactctcatggaactcttgggatattat 1193
Query: 301 atcgatcagtttactgaacgtgcaacaaatgctaaggatgagttgtacggaattagacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1194 atcgatcagtttactgaacgtgcaacaaatgctaaggatgagttgtacggaattagacta 1253
Query: 361 agagtcgtaggagatctttcattattgagtgaagagttgctcaagaagattcgtaacgca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1254 agagtcgtaggagatctttcattattgagtgaagagttgctcaagaagattcgtaacgca 1313
Query: 421 gagaaattgactcgtgatggacaagagttcgtgttgtaccttgccttgccctacacatcg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1314 gagaaattgactcgtgatggacaagagttcgtgttgtaccttgccttgccctacacatcg 1373
Query: 481 cgtaacgatattgcacattctatgcaggttaccaccgacaaatgcatcaattctaacgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1374 cgtaacgatattgcacattctatgcaggttaccaccgacaaatgcatcaattctaacgag 1433
Query: 541 gatatcacagaacaagccttgactgataacatgtatttcgaacagtactccaataaatgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1434 gatatcacagaacaagccttgactgataacatgtatttcgaacagtactccaataaatgt 1493
Query: 601 gatctattgattagaacaagtggacacacaaggttgtcagattatatgctatggcaggtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1494 gatctattgattagaacaagtggacacacaaggttgtcagattatatgctatggcaggtc 1553
Query: 661 catgaaggtagtattatcgagtttgtcgactgtctatggccagattttaatttctggagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1554 catgaaggtagtattatcgagtttgtcgactgtctatggccagattttaatttctggagg 1613
Query: 721 ctatattggataatgttgaagtggagtttctaccaaacttggcaaaacgccagtmagttg 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1614 ctatattggataatgttgaagtggagtttctaccaaacttggcaaaacgccagtcagttg 1673
Query: 781 ccagatcctgttcgtactagaactcgcgtgttt 813
|||||||||||||||||||||||||||||||||
Sbjct: 1674 ccagatcctgttcgtactagaactcgcgtgttt 1706
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4537
Number of Sequences: 1807
Number of extensions: 4537
Number of successful extensions: 30
Number of sequences better than 1.0e-20: 1
length of query: 813
length of database: 10,358,551
effective HSP length: 16
effective length of query: 797
effective length of database: 10,329,639
effective search space: 8232722283
effective search space used: 8232722283
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)